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INBIOSIS Workshop Series on 17-18 Nov 2021
▶️ Topic - Molecular Dynamic Simulation of Protein-ligand Complex

You will learn about
1️⃣ How to setup simulation for a protein-ligand complex. Participants will experience the setup of protein-ligand complex using Gromacs and conduct the simulation. Subsequently, data analysis of the simulation for protein-ligand interaction that include hydrogen bond analysis, and ligand binding affinity calculated using MMPBSA approach.
2️⃣ Participants will learn how MD can best be applied to research projects. Lastly, in-vitro verification study of biomolecular interactions and thermodynamics will be presented by speaker.

🌐 Visit here for Registration
Fees details attached in brouchre.
In case of queries , email at inbiosis.workshop@gmail.com

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#resource #colab #mdsimulation #online

New paper describes Google Colab notebooks to efficiently run molecular dynamics simulations of proteins

Following the success of AlphaFold on Google Colab, this new work brings the OpenMD package for molecular dynamics simulations to online notebooks for everybody to run quite powerful GPUs for free.

Now, researchers from the University of California at Riverside in the US introduced a set of new Google Colab notebooks that facilitate running another key type of tasks central to molecular modeling of proteins: molecular dynamics simulations.

📚Read the Tutorial/Blog here
https://towardsdatascience.com/new-preprint-describes-google-colab-notebook-to-efficiently-run-molecular-dynamics-simulations-of-9b317f0e428c

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